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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952915.1_cds_XP_016492337.1_82558
CDS Infomation

[gene=LOC107811857] [db_xref=GeneID:107811857] [protein=U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like] [protein_id=XP_016492337.1] [location=complement(join(26675..27274,27582..27689,28304..28421,28993..30296))] [gbkey=CDS]
Sequence

ATGAATCCCTTTCCTCCGCCGCCAACACTACCACCCTCACCGTCCTCCAGCTTTCTGCCA
CCGCTACCGCCACCATACTTTCACCAGCCCACTCCCACCACTACTCCTCCGGCATTCGAT
CTTCCCACTGCTCTCTCAACCCTCACGTCTCTCCTCAGTCTCTCATCAACCACTCTCCAC
TCTCTCTCTTCCCTTCTCCCCACCCCCCTCTCCCCCTGTCAAACCCTATTCCCATGCCCT
TTCAATCTCAACCATCATCTCCCCCTTTCTTCCCTCTTCTCTCACTCCCTTCATTGCCCT
ACACCTATTCCCTCAAATCACATCGAAACCCTAACCCAAAACCTCAAATACCCCCACACC
CTTTACTCCTCCTCAAACCCCAACCCCTTTACTTTACCTCTACAAGATTCACAATCTGAC
CTTTGCTTCTCTCTCGAGACCTACCTTGATTTCGAAAATGAAAATCCCACTTCCTTCTAT
TATGATTGTCCTGGTGTTGTTTCTTTCCCCATTAAAGGCGAAAATGCTCCTCCTCCTATG
CTCACTTTGCCTGCTGTTTTATCTTCAGAATGTGCTAATTTTGGTAGAAATTTGATGTTG
TTTTCGAATGAATTGATCAGGGTTCTTCCTTCGGAGGCATATGCAATTAGGAATGAAACT
GATTGTTGGAATGATTTTCCATTTATGTATTCATATCGCGTTCTTCGTGTTATTTTGGGA
TTAGGCATGAAAAGTGTCGAGTGTTTGTCTACATGGTTAGTAGCTAATTCGGGTAGGTGT
TATCGTATTGTGCTCGATTTGGCAATGAGGGATCATATGCTTGTTCTGTTTAAGCTTTCT
TTGAAGGCTATTGTTAGGGAAGCTATTGATTTAGCTAGTACATTTTACAATGAAGAAGCG
GAGGGATCGGATTTGAGTGGACGGAGTTTTAAGTGTCCGGTATTAGTTCAGGTTTTGATG
TGGTTAGCGACCCAGCTTTCTGTGTTGTATGGGGACGCGAACGGAAAATTGTTTGCTATT
AGTATGCTGAAGCAATGTATCTGTGCATTTAGTTCTTGTATGTTCAATGAATCTACTGAT
ACGAAAAGAGGGGATGGAAATGTTAAAGAGTCACAGGAAAGTGGTGAGCCACTTAAAAGT
AGGATAGAGAATGCGGGGACGGATATATCGGCCGAAGCACTCTCTAAAAGCCCGATTTTT
GTTTCCCAAGTTGCAGCAGCTGTTGCAGCGTTGCATGAACGATCTACGCTTGAAGAAAAG
CTCAAAGCACTGAGGAATTTACCAGCACTTCCAGCTTACCAACGATCGATGGAGCACTCT
TACATTTCAAATAAAGCAGATGAGGAACGGCAAAAACGCCCTAATTACAGAGCTCTGCTC
GAACATGATGGATTTCTGTGGCAGCATTCGCGAAATAATCAGGACACAAATAGAACAAAG
TCGAGAGAGGAATTATTAGCTGAGGAAAGGGATTATAAACGTAGAAGAATGTCATATCGT
GGAAAAAAGTTGAAGCGGTCAACAACACAGGTTATGAGGGACATAATTGAGGAATACATG
GAGGAAATCAGGCAAGCAGGTGCCATCAATTGCCCAACAAAAGGAGCTGAAGAGGCCAAA
CTTCCACTTTCCTCAACTTACAGAATGGATAATTCTTATGTGGATAAAGCTGAGTTTGGA
AAGAGGCAGCTGGATTCATCTGCTTTAAGCAAAGGAAGGGAAGGTGGTTATGGGAAGGAG
TTTCATACTGATGGAGAAGTCCATTCAGCAGACTTCAAAGATGATTATTCTGCAGATATG
GAAAAAGCATCTCGGTGGCATCATCAACATGTAGTGGCAGAAAGAAGTAATGGGAGGTCC
AGACAGGACCCAAAAAGTTACTCTAGAAGCCCAAATCAGCGAGAGGCTAGTGCCTACTCA
CATGAATCAACAATCACCCAAGAGAAGAGAGACTTTTCGAAAGAATCTAGAGAGAATTTT
CCCAGAAGCTCCAGCAGAAGCTACCACAAATCACATGAGAAAAGTAGTTCACGTAGGGAA
AGAAGTGATTGTAATTCTGACATCAAGAAACGGAAGGCAAGGGACGCTTCTGATGATTTT
GATGACCGATATGATCCATCAAAATCTTAG

Peptide Sequence

PEP ID

XP_016492337.1
PEP Infomation

PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like [Nicotiana tabacum]
Sequence

MNPFPPPPTLPPSPSSSFLPPLPPPYFHQPTPTTTPPAFDLPTALSTLTSLLSLSSTTLH
SLSSLLPTPLSPCQTLFPCPFNLNHHLPLSSLFSHSLHCPTPIPSNHIETLTQNLKYPHT
LYSSSNPNPFTLPLQDSQSDLCFSLETYLDFENENPTSFYYDCPGVVSFPIKGENAPPPM
LTLPAVLSSECANFGRNLMLFSNELIRVLPSEAYAIRNETDCWNDFPFMYSYRVLRVILG
LGMKSVECLSTWLVANSGRCYRIVLDLAMRDHMLVLFKLSLKAIVREAIDLASTFYNEEA
EGSDLSGRSFKCPVLVQVLMWLATQLSVLYGDANGKLFAISMLKQCICAFSSCMFNESTD
TKRGDGNVKESQESGEPLKSRIENAGTDISAEALSKSPIFVSQVAAAVAALHERSTLEEK
LKALRNLPALPAYQRSMEHSYISNKADEERQKRPNYRALLEHDGFLWQHSRNNQDTNRTK
SREELLAEERDYKRRRMSYRGKKLKRSTTQVMRDIIEEYMEEIRQAGAINCPTKGAEEAK
LPLSSTYRMDNSYVDKAEFGKRQLDSSALSKGREGGYGKEFHTDGEVHSADFKDDYSADM
EKASRWHHQHVVAERSNGRSRQDPKSYSRSPNQREASAYSHESTITQEKRDFSKESRENF
PRSSSRSYHKSHEKSSSRRERSDCNSDIKKRKARDASDDFDDRYDPSKS

Transcript Sequence

Gene sequence data has not been registered.